SRX16983341
GSM6436755: eNPCs, wt, SMARCA4/BRG1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Smarca4

Cell type

Cell type Class
Neural
Cell type
Neural progenitor cells
NA
NA

Attributes by original data submitter

Sample

source_name
primary NPCs
chip antibody
SMARCA4/BRG1, ab110641, abcam
cell type
primary NPCs
genotype
wt

Sequenced DNA Library

library_name
GSM6436755
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Active Motif

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
39750962
Reads aligned (%)
89.7
Duplicates removed (%)
20.7
Number of peaks
8954 (qval < 1E-05)

mm9

Number of total reads
39750962
Reads aligned (%)
89.6
Duplicates removed (%)
20.7
Number of peaks
8934 (qval < 1E-05)

Base call quality data from DBCLS SRA